MLExpResso 0.1.6

  • new functions: plot_means, plot_pvalues
  • plot_means, plot_pvalues, plot_volcano, plot_methylation_path functions added to the QuickStart

MLExpResso 0.1.6

MLExpResso 0.1.5

  • more tests for expression and methylation (based on packages methyAnalysis and edgeR)
  • adding a simple guide for the user - QuickStart
  • first unit tests for package
  • more parameters in public functions
  • new public function names (old -> new):
  • test_diff -> calculate_test
  • comparison table -> calculate_comparison_table
  • map_to_gene -> aggregate_probes
  • mehylation_path -> plot_methylation_path
  • volcano_plot -> plot_volcano
  • group_boxplot -> plot_diff_boxplot
  • visual_volcano -> plot_volcanoes
  • visual_gene -> plot_gene
  • report_generate -> generate_report